Protein ZmbHLH27
ZmbHLH27 is a protein in the bHLH family.
Information
TF Name: ZmbHLH27
Species: Maize
TF Family: bHLH
Gene Name(Synonym): BHLH27
Uniprot ID: B4FE10
Subgenome: 1

Protein ZmbHLH27

ZmbHLH27 is a protein in the bHLH family.

Overview of domains present in v5 transcripts
PF00010
Zm00001eb055990_T002
Zm00001eb055990_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d033870DAPseq no logo sequence fimo position
Zm00001d033870DAPseq no logo sequence fimo position
Zm00001d033870ChIPseq no logo sequence fimo position
Zm00001d033870PChIPseq no logo sequence fimo position

Interactions where ZmbHLH27 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmbHLH27 is the target  
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There are 43 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb055990_T002 from maize genome v5

Amino Acid Sequence
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MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00010
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Nucleotide Sequence
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GTAACAAACACCACTTAGCAGCAGG...

GRMZM2G092091_T01 from maize genome v3


Related TFome: pUT3400

Amino Acid Sequence
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MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

Nucleotide Sequence
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GTAACAAACACCACTTAGCAGCAGG...

GRMZM2G092091_T02 from maize genome v3

Amino Acid Sequence
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MEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEI
INYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPGSSSLTAPFNQGIVQPAMMCNISNPADV
LHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

Nucleotide Sequence
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GAGCTCACTTCCTCATCTAATCTAC...

Zm00001d033870_T001 from maize genome v4

Amino Acid Sequence
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MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGIYVILSSSMK
IEQ

Nucleotide Sequence
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ACCTACGCATTCAAATAGCCTCACG...

Zm00001d033870_T002 from maize genome v4

Amino Acid Sequence
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MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

Nucleotide Sequence
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ACCTACGCATTCAAATAGCCTCACG...

Zm00001d033870_T003 from maize genome v4

Amino Acid Sequence
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MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

Nucleotide Sequence
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CTTAGCAGCAGGCTCTTGCGTCCGT...

Zm00001d033870_T004 from maize genome v4

Amino Acid Sequence
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MGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRKGVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDS
SDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKL
STVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPGSSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMW
EGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

Nucleotide Sequence
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TAGTGGACAACATGGGTTTGGACCT...

Zm00001d033870_T005 from maize genome v4

Amino Acid Sequence
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MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKVTSPLFGASISQKLL

Nucleotide Sequence
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GATCCTCGTTTGGGGAGGGCCAAGA...

Zm00001d033870_T006 from maize genome v4

Amino Acid Sequence
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MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEVVIVHL

Nucleotide Sequence
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TCAGTGGCAGGTAACAAACACCACT...

Zm00001d033870_T007 from maize genome v4

Amino Acid Sequence
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MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERVNFSLV
ISNYQFSLLYYLHSHLKLMKLCS

Nucleotide Sequence
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GGCGATCCTCGTTTGGGGAGGGCCA...

Zm00001eb055990_T001 from maize genome v5

Amino Acid Sequence
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MYSGQQSDQGPSANSGREFSEANWNSYTMHQKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRK
GVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKI
SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPG
SSSLTAPFNQGIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNFNPGVAADSGTNNSGSMKIEQ

Nucleotide Sequence
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GGAATAGAGAAGAGAGAGAGAGAGA...


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